Voronoi diagram computation uses multiple processor cores, unless this parameter is set to no. A new parameter was added: parallel yes|no.If your conclusions are sensitive to small changes in tunnel radii or lengths, we strongly recommend to analyse a molecular dynamics trajectory rather than a single static structure. However, the properties and ordering of individual tunnels in static structures may change, which is due to a principal limitation of geometry based analysis of tunnels in static structures. Utilization of additively weighted Voronoi diagram did not change significantly the properties of tunnel clusters in molecular dynamics trajectory of haloalkane dehalogenase DhaA.This can be useful for the analysis of large structures, e.g., hundred thousands of atoms. Memory requirements and computational times have significantly decreased.It is possible to return to the previously used ordinary Voronoi diagram by the parameter “awvd no”. This version uses additively weighted Voronoi diagram.Fixed cavities not rendering on some Intel HD GPUsĬlick here to see the full change log (including older versions).ĬAVER (command line version) Current version:.Fixed error when opening Application Settings while running on Java 9.Enabled changing of maximum application memory from Application Settings.Refer to this page The General pane of Security & Privacy preferencesĬhangelog - CAVER Analyst 2.0 (BETA 2) Features:

System since the application does not come from the App Store. The problem is connected to the security settings of the To the Trash.' This message can occur when unzipping the CAVER Analyst on the MacOS system Message: 'caver_analyst-macos_universal.zip is damaged and can't be opened. Netsh advfirewall set global StatefulFTP disable. The way to work thisĪround is to run following command from your Windows command line with administrator rights: If you are using Java 1.7 and Windows 7, downloading filesįrom PDB database might not work due to an error in the Windows firewall. To sove this issue simply click at More info and then Run anyway.įor more information reffer to Windows Defender SmartScreen. This is caused by the fact that the application is currently unsigned. Running this app might put your PC at risk.' may appear. When using Windows a message 'Windows Defender SmartScreen prevented an unrecognized app from starting.

AMD/ATI Radeon or nVIDIA GeForce family graphics card.

Software and hardware requirements Minimum configuration:

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